deRSE23 - Konferenz für ForschungssoftwareentwicklerInnen in Deutschland

Mon. 20

Tue. 21

Wed. 22

09:00

10:00

11:00

12:00

13:00

14:00

15:00

16:00

17:00

18:00

19:00

20:00

21:00

22:00

Registration

9:00 - 10:00 (1h)

Registration

The Registration Desk is opened. Get your badge!

Welcome

10:00 - 10:30 (30min)

Welcome

Keynote: Engineering Software Ergonomics

10:30 - 11:30 (1h)

Keynote: Engineering Software Ergonomics

12527

Reinhard Keil

Group Photo

11:30 - 12:00 (30min)

Group Photo

We will take a group photo. Please make sure to not immediately go to lunch!

Lunch

12:00 - 13:00 (1h)

Lunch

-1

Software Sustainability
Workflows - Reproducibility - Orchestration
Maturing with your software

13:00 - 14:00 (1h)

Software Sustainability

12714

Bernadette Fritzsch

› Research Software Engineering in OpenLB: Refactoring a Legacy Code to State-Of-The-Art Performance - Adrian Kummerlaender, Karlsruhe Institute of Technology (KIT) 13:00-13:20 (20min)

› Making 30k lines of C++ code future-proof - Deniz Kılıç, Forschungszentrum Jülich 13:20-13:40 (20min)

› Embracing legacy research code: Should we? If so, how? - Joscha T. Schmiedt, Brain Research Institute Universität Bremen 13:40-14:00 (20min)

13:00 - 14:00 (1h)

Workflows - Reproducibility - Orchestration

12715

Philipp Schäfer

› Non-Sequential Machine Learning Pipelines with pyWATTS - Benedikt Heidrich, Karlsruher Institut für Technologie - Kaleb Phipps, Karlsruher Institut für Technologie 13:00-13:20 (20min)

› ZnTrack: Workflow Management and Data Version Control - Fabian Zills, Institute for Computational Physics, University of Stuttgart 13:20-13:40 (20min)

› Want to track pandemic variants faster? Scalable and reproducible SARS-CoV-2 genome reconstruction for genomic surveillance - Marie Lataretu, Methods Development, Research Infrastructure and Information Technology, Bioinformatics and Systems Biology, Robert Koch Institute, Berlin 13:40-14:00 (20min)

13:00 - 14:00 (1h)

Maturing with your software

12527

Florian Goth

› LIBRSB: journey from PhD by-product to universally usable Sparse Linear Algebra Library - Michele Martone, Leibniz Supercomputing Centre 13:00-13:20 (20min)

› LearnLib: an open-source library for automata learning algorithms - Falk Howar, TU Dortmund 13:20-13:40 (20min)

› The four elements of achieving research software sustainability for long tail projects - Stephan Druskat, German Aerospace Center (DLR), Institute for Software Technology, Humboldt-Universität zu Berlin, Department of Computer Science, Friedrich Schiller University Jena, Dept. of English Studies 13:40-14:00 (20min)

Themed break - de-RSE Chapter/Bundesländer

14:00 - 14:30 (30min)

Themed break - de-RSE Chapter/Bundesländer

-1

Research Software Support
Integration vs. Modularity
Organization-wide initiatives

14:30 - 15:30 (1h)

Research Software Support

12714

Frank Löffler

› Fostering quality improvement for RSE projects through consulting offers - Förster Thomas, Helmholtz-Zentrum Dresden-Rossendorf (HZDR) 14:30-14:50 (20min)

› A Research Software Engineering Workflow for Computational Science and Engineering - Moritz Schwarzmeier, TU Darmstadt 14:50-15:10 (20min)

› Opening Pandora's box of HPC software development - Ivo Kabadshow, FZ Juelich 15:10-15:30 (20min)

14:30 - 15:30 (1h)

Integration vs. Modularity

12715

Daniel de Mentock

› From disconnected elements to a harmonious ecosystem: the Epiverse-TRACE project - Hugo Gruson, data.org 14:30-14:50 (20min)

› ESPResSo and LbmPy: Re-usable and modular interface between particle-based and lattice-based simulation codes - Jean-Noël Grad, Institute for Computational Physics, University of Stuttgart 14:50-15:10 (20min)

› Modularity in Software-Hardware Interaction for Experimental Physics, an Example - Yudong Sun, Max-Planck-Institute für Quantenoptik, Hans-Kopfermann-Straße 1, 85748 Garching bei München, Fakultät für Physik, Ludwig-Maximilians-Universität München, Am Coulombwall 1, 85748 Garching bei München 15:10-15:30 (20min)

14:30 - 15:30 (1h)

Organization-wide initiatives

12527

Claire Wyatt

› SURESOFT: Towards Sustainable Reseach Software - Sören Peters, Technische Universität Braunschweig = Technical University of Braunschweig [Braunschweig] - Sven Marcus, Technische Universität Braunschweig = Technical University of Braunschweig [Braunschweig] - Jan Linxweiler, Technische Universität Braunschweig = Technical University of Braunschweig [Braunschweig] 14:30-14:50 (20min)

› Research Software Engineering (RSE) als Service einer wissenschaftlichen Bibliothek - Ingo Pfennigstorf, Göttingen State and University Library - Kristine Schima-Voigt, Göttingen State and University Library - Mustafa Dogan, Göttingen State and University Library 14:50-15:10 (20min)

› HPC.NRW - Supporting academic HPC - Kamil Braschke, HPC.NRW / Bergische Universität Wuppertal 15:10-15:30 (20min)

Coffee break

15:30 - 16:00 (30min)

Coffee break

-1

Data Portals/Platforms
Automation
Metadata

16:00 - 17:00 (1h)

Data Portals/Platforms

12714

Daniel de Mentock

› The DJango Academic Community Platform (DJAC): An open-source website for transparent discussion, collaboration and management in an academic community - Philipp S. Sommer, Helmholtz- Zentrum Hereon 16:00-16:20 (20min)

› GlobaLID: A research data infrastructure for lead isotope data in archaeology - Thomas Rose, Goethe-University Frankfurt am Main, Institut für Geowissenschaften, Deutsches Bergbau-Museum Bochum, Forschungsbereich Archäometallurgie 16:20-16:40 (20min)

› A look into the architecture of MINE - a data portal for historical text - Triet Doan, Gesellschaft für wissenschaftliche Datenverarbeitung mbH Göttingen 16:40-17:00 (20min)

16:00 - 17:00 (1h)

Automation

12715

Moritz Schwarzmeier

› Mapping Research Software Landscapes through Exploratory Studies of GitHub Data - Anna-Lena Lamprecht, Universität Potsdam 16:00-16:20 (20min)

› Wie können aus Backlogs Unit Tests erzeugt werden? - Ursula Oesing, Iris Grcic 16:20-16:40 (20min)

› Architecture Recovery and Optimization for Scientific Software - Reiner Jung, Kiel University 16:40-17:00 (20min)

16:00 - 17:00 (1h)

Metadata

12527

Daniel Nüst

› The Citation File Format: Providing citation metadata for research software - Stephan Druskat, German Aerospace Center (DLR), Institute for Software Technology, Humboldt-Universität zu Berlin, Dept. of Computer Science 16:00-16:20 (20min)

› HERMES: Easing the path to FAIR software publications - Stephan Druskat, German Aerospace Center (DLR), Institute for Software Technology, Humboldt-Universität zu Berlin, Department of Computer Science 16:20-16:40 (20min)

› Scientific Metadata: From Filesystem to Metadata Catalog - David Pape, Helmholtz-Zentrum Dresden-Rossendorf 16:40-17:00 (20min)

Logistics break

17:00 - 17:15 (15min)

Logistics break

-1

Policies and legal frameworks
AI & ML

17:15 - 17:55 (40min)

Policies and legal frameworks

12527

Bernadette Fritzsch

› All you need to know about Software Licenses as an RSE - Tobias Schlauch, German Aerospace Center (DLR), Institute for Software Technology 17:15-17:35 (20min)

› From Research to Regulated Software - Christoph Kämpf, Fraunhofer Institute for Cell Therapy and Immunology IZI 17:35-17:55 (20min)

17:15 - 17:55 (40min)

AI & ML

12714

Tomas Stary

› Developing Reliable Research Software for AI-based Evaluation of Realtime Cardiac MRI - Philipp Rosauer, Institute for Software Technology, German Aerospace Center (DLR), Cologne 17:15-17:35 (20min)

› DL4PuDe: Deep-Learning Framework for Pushing Detection in Pedestrian Dynamics - Ahmed Alia, Forschungszentrum Jülich GmbH 17:35-17:55 (20min)

Poster session
Demo Session
youngRSE competition winner announcement

18:30 - 20:00 (1h30)

Poster session

12670

› hypertiling - Hyperbolic Lattices for Everyone! - Florian Goth, Julius-Maximilians-Universität Würzburg [Wurtzbourg, Allemagne] 19:00-19:01 (01min)

› HIFIS - Boosting Research Software Engineering in Helmholtz - Huste Tobias, Helmholtz-Zentrum Dresden-Rossendorf 19:01-19:02 (01min)

› Disentangle a pedestrian trajectory analysis tool - How to convert a spaghetti C/C++ tool to a python library - Schrödter Tobias, Forschungszentrum Jülich GmbH 19:02-19:03 (01min)

› A Simple Angle-resolved Time-of-Flight Data & Analysis Module with Python - Haydar Altuğ Yıldırım, Leibniz-Institut für Astrophysik Potsdam, Freie Universitaet Berlin 19:03-19:04 (01min)

› A Memory Layout DSL for hypercubic lattice data structures - Michele Mesiti, Karlsruhe Institute of Technology 19:04-19:05 (01min)

› Result Assessment Tool (RAT) - Sebastian Sünkler, HAW Hamburg 19:05-19:06 (01min)

› Metador: A metadata-centric framework for enabling FAIR research (meta)data - Anton Pirogov, Forschungszentrum Jülich GmbH 19:06-19:07 (01min)

› Building and exploring databases of research metadata with Beaverdam - Heather More, Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6) and JARA-Institute Brain Structure-Function Relationships (INM-10), Jülich Research Centre, Jülich, Germany, Institute for Advanced Simulation (IAS-9), Jülich Research Centre, Jülich, Germany 19:07-19:08 (01min)

› Connecting research data from files, ELN, or data repositories using the open-source semantic research-data management toolkit CaosDB - Florian Spreckelsen, IndiScale GmbH, Lotzestraße 22a, 37083 Göttingen 19:08-19:09 (01min)

› Pipelines for Software Metadata Conversion and Publication - Tomas Stary, Karlsruhe Institut of Technology 19:09-19:10 (01min)

› The NFDI4Culture Software Consulting Agency - Daniel Jettka, Universität Paderborn 19:10-19:11 (01min)

› Rigor, reproducibility and validation in neural data analysis: a discussion based on the Elephant toolbox - Michael Denker, Institute of Neuroscience and Medicine and Institute for Advanced Simulation and JARA BRAIN Institute, Jülich Research Centre 19:11-19:12 (01min)

› Facilitating “Great Bake Offs” of Computational Workflows - Anna-Lena Lamprecht, Universität Potsdam 19:12-19:13 (01min)

› HELIPORT — An Integrated Research Data Lifecycle - Oliver Knodel, Helmholtz-Zentrum Dresden-Rossendorf 19:13-19:14 (01min)

› RCE: An Orchestration Software for Multidisciplinary Software Tool Chains - Jan Flink, German Aerospace Center (DLR), Institute for Software Technology - Kathrin Schaffert, German Aerospace Center (DLR), Institute for Software Technology - Alexander Weinert, German Aerospace Center (DLR), Institute for Software Technology 19:14-19:15 (01min)

› Regional research software communities: Bridging local and national research software activities - Jeremy Cohen, Department of Computing, Imperial College London 19:15-19:16 (01min)

› Software development for working with oral corpora - Elena Frick, Leibniz-Institut für Deutsche Sprache (IDS) 19:16-19:17 (01min)

› RSEng expertise for scientific peer review with CODECHECK - Daniel Nüst, CODECHECK Initiative, de-RSE, NFDI4Earth 19:17-19:18 (01min)

› Open Science Services for Good Scientific Practice in a Digital Age - Heidi Seibold, Institute for Globally Distributed Open Research and Education 19:18-19:19 (01min)

› How to enrich scientific research with metadata? - Thomas Gruber, Helmholtz-Zentrum Dresden-Rossendorf 19:19-19:20 (01min)

› Applying pyWATTS to Non-Sequential Machine Learning Use-Cases - Kaleb Phipps, Karlsruher Institut für Technologie - Benedikt Heidrich, Karlsruher Institut für Technologie - Oliver Neumann, Karlsruher Institut für Technologie 19:20-19:21 (01min)

› ideal.II a Galerkin space-time extension to the finite element library deal.II - Jan Philipp Thiele, Institute of Applied Mathematics, Leibniz University Hannover 19:21-19:22 (01min)

› OCTOPOS.jl: A user-friendly tool for synonymous genetic code optimization - Simon Christ, Leibniz University Hannover 19:22-19:23 (01min)

› Improving the user experience for diffraction data analysis - 19:23-19:24 (01min)

18:30 - 20:00 (1h30)

Demo Session

12670

N.N.

› Architecture Recovery and Optimization for Scientific Models - Reiner Jung, Kiel University 19:00-19:01 (01min)

› Quicksetup-ai: reusable template for clean and reproducible code - Isra Mekki, Helmholtz AI, Helmholtz Munich 19:01-19:02 (01min)

› The HERMES workflow for automatic software publication - Michael Meinel, German Aerospace Center (DLR), Institute for Software Technology 19:02-19:03 (01min)

19:30 - 19:45 (15min)

youngRSE competition winner announcement

We announce the winners of the youngRSE contestants!

Conference Dinner

20:00 - 22:00 (2h)

Conference Dinner

-1

Industry talk: Reproducing your research with the AWS Cloud Development Kit

9:00 - 9:30 (30min)

Industry talk: Reproducing your research with the AWS Cloud Development Kit

12527

Tim Cutts(AWS)

Cloud Technologies
Initial Software Project planning

9:30 - 10:30 (1h)

Cloud Technologies

12527

Florian Goth

› Research Software In The Cloud? - Peter Schmidt, University College, London 09:30-09:50 (20min)

› From source code to software as a service, how to make software more accessible? - Uwe Konrad, Helmholtz-Zentrum Dresden-Rossendorf - Tobias Huste, Helmholtz-Zentrum Dresden-Rossendorf - Thomas Schnicke, Helmholtz Zentrum für Umweltforschung = Helmholtz Centre for Environmental Research 09:50-10:10 (20min)

› MetaHub Registry: An OCI compliant Container Registry to reduce the complexity of herding scientific software containers. - Kniep Christian, QNIB Solutions 10:10-10:30 (20min)

9:30 - 10:30 (1h)

Initial Software Project planning

12714

Claire Wyatt

› The HiRSE_PS project - evaluating and building support measures for RSE within the Helmholtz Association - René Caspart, Steinbuch Centre for Computing (SCC), Karlsruher Institut für Technologie 09:30-09:50 (20min)

› Reusable Research Software Components in the GDart Ecosystem - Falk Howar, TU Dortmund University 09:50-10:10 (20min)

› Stakeholder orientated documentation - Jan Bernoth, University of Potsdam 10:10-10:30 (20min)

Coffee break

10:30 - 11:00 (30min)

Coffee break

-1

Education / Digital Literacy
Heterogeneous Computer Architectures

11:00 - 12:30 (1h30)

Education / Digital Literacy

12527

Frank Löffler

› The rocky road to introducing new software tools in existing teams or how to teach your colleagues to do better. - Lukas Lamm, RWTH Aachen University 11:00-11:20 (20min)

› HIFIS: Building a Workshop Portfolio from 0 - Fredo Erxleben, Helmholtz-Zentrum Dresden-Rossendorf 11:20-11:40 (20min)

› Policies und Networking für den nachhaltigen Umgang mit Forschungssoftware in Helmholtz - Heinz Pampel, Helmholtz-Gemeinschaft = Helmholtz Association 11:40-12:00 (20min)

› Introducing the Fortran-lang community - Ivan Pribec, Leibniz Supercomputing Centre, Garching 12:00-12:20 (20min)

11:00 - 12:30 (1h30)

Heterogeneous Computer Architectures

12714

Dmitry Nikolaenko

› ACME: Flexible Scalability for Research Software - Stefan Fuertinger, Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society 11:00-11:20 (20min)

› Coping with the heterogeneous computing landscape using modern programming models and languages - Steffen Christgau, Zuse Institute Berlin 11:20-11:40 (20min)

› GPU-Unterstützung in der Bibliotheksentwicklung - Olaf Krzikalla, DLR e.V., Institut SP 11:40-12:00 (20min)

› Experiences in promoting the integration of numerical research libraries to domain applications - Xinzhe WU, Jülich Supercomputing Centre 12:00-12:20 (20min)

Lunch

12:30 - 13:30 (1h)

Lunch

-1

SWC: Software Management Plans
Challenges of Big projects
Domain Specific Languages
Logistics Break
General Overviews
User Interfaces and Experiences

13:30 - 15:30 (2h)

SWC: Software Management Plans

12715

Renato Alves

› Software Management Plans - Renato Alves, EMBL Heidelberg 13:30-15:30 (2h)

13:30 - 14:50 (1h20)

Challenges of Big projects

12527

Tomas Stary

› Boosting complex Systems Research through RSE Collaboration - Jeffrey Kelling, Helmholtz-Zentrum Dresden-Rossendorf, Chemnitz University of Technology / Technische Universität Chemnitz 13:30-13:50 (20min)

› DAMASK: Challenges in collaborative development and outlook - Daniel Otto de Mentock, Max Planck Institute for Iron Research 13:50-14:10 (20min)

› User Experience in the Research Software Ecosystem - Jan Dittrich, Superbloom 14:10-14:30 (20min)

13:30 - 14:30 (1h)

Domain Specific Languages

12714

Michele Mesiti

› User centering and model-based development - a perfect match? - Jörn Kreutel, BHT Berlin 13:30-13:50 (20min)

› DSL for Configuration and Parameter Setup of Scientific Models - 13:50-14:10 (20min)

› Fortran as a General-Purpose Programming Language - Philipp Engel, Deutsches Archäologisches Institut; Technische Universität Berlin 14:10-14:30 (20min)

14:30 - 14:50 (20min)

Logistics Break

-1

14:50 - 15:30 (40min)

General Overviews

12527

Moritz Schwarzmeier

› Agile Forschungssoftware-Entwicklung - Lilja Mareike Sautter, Göttingen State and University Library - Kay Liewald, Göttingen State and University Library 14:50-15:10 (20min)

› Simple and pragmatic guidelines for reproducibility in scientific data analysis workflows - Alexander Schlemmer, Max Planck Institute for Dynamics and Self-organization, Am Fassberg 17, 37077 Göttingen, German Center for Cardiovascular Research (DZHK), Partner Site Göttingen, Robert-Koch-Str. 42a, 37075 Göttingen 15:10-15:30 (20min)

14:50 - 15:30 (40min)

User Interfaces and Experiences

12714

Daniel Nüst

› PedDashboard: Web-based Exploratory Visualization and Interactive Analysis of Pedestrian's Trajectories using Python - Mohcine Chraibi, Mohcine Chraibi, Forschungszentrum Jülich GmbH 14:50-15:10 (20min)

› Entwicklung einer Webapplikation zur Darstellung wissenschaftlicher Daten und Ergebnisse - Luca Spataro, DLR Institut für Softwaretechnologie - Rebecca Brydon, DLR Institut für Softwaretechnologie 15:10-15:30 (20min)

Coffee break

15:30 - 16:00 (30min)

Coffee break

-1

Musicology

16:00 - 17:00 (1h)

Musicology

12527

Phillip Schäfer

› The (Un)Answered Question – Eine musikalische Data Science Versuchsanordnung - Lynn von Kurnatowski, German Aerospace Center 16:00-16:20 (20min)

› Prototyp für eine Benutzeroberfläche für KI-gestützte Takterkennung von Digitalen Musikalien - Lukas Retschmeier, Technische Universität München = Technical University of Munich 16:20-16:40 (20min)

› MEIGarage as an example of collaboration on long-living research software in different research communities - Anne Ferger, University of Paderborn 16:40-17:00 (20min)

Outlook into 2023 an Farewell

17:00 - 17:15 (15min)

Outlook into 2023 an Farewell

SWC: Welcome
Allianzinitiative
SWC: Skill-Up
Coffee break
Establishing RSEs
SWC: Community Discussion

9:00 - 9:45 (45min)

SWC: Welcome

12711

Toby Hodges

9:00 - 11:00 (2h)

Allianzinitiative

12713

Stephan Janosch

9:45 - 10:30 (45min)

SWC: Skill-Up

12711

Toby Hodges

10:30 - 11:00 (30min)

Coffee break

-1

10:45 - 12:15 (1h30)

Establishing RSEs

12712

Dominic Kempf

› Establishing RSE Departments in German Research Insititutions - Dominic Kempf, Heidelberg University 10:45-12:15 (1h30)

11:00 - 12:00 (1h)

SWC: Community Discussion

12711

Rabea Müller

Teaching RSEng

12:15 - 13:00 (45min)

Teaching RSEng

12712

Heidi Seibold

› Teaching and Learning Research Software Engineering - Heidi Seibold, Institute for Globally Distributed Open Research and Education - Samantha Wittke, CSC- IT center for science, Espoo, coderefinery.org - Philipp Thiele, Institute of Applied Mathematics, Leibniz University Hannover - Jeremy Cohen, Department of Computing, Imperial College London - Florian Goth, Julius-Maximilians-Universität Würzburg [Wurtzbourg, Allemagne] 12:15-13:00 (45min)

Lunch

13:00 - 14:00 (1h)

Lunch

-1

Teaching RSEng

14:00 - 15:15 (1h15)

Teaching RSEng

12712

Heidi Seibold

Educational material with mkdocs

15:15 - 17:15 (2h)

Educational material with mkdocs

12711

Thomas Förster

› Generating your educational material or documentation with mkdocs and pipelines - Förster Thomas, Helmholtz-Zentrum Dresden-Rossendorf (HZDR) 15:15-17:15 (2h)